Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906548.1_cds_XP_016456692.1_50505
CDS Infomation

[gene=LOC107780646] [db_xref=GeneID:107780646] [protein=two-component response regulator-like APRR5 isoform X2] [protein_id=XP_016456692.1] [location=complement(join(20601..20722,20832..21169,21655..21976,22094..22262,22451..22606,22721..22851,22943..23104,24174..24417))] [gbkey=CDS]
Sequence

ATGGGTGAAGTTGTTGTCAGCAGCGAAAATGATATGGAAGTTATAGGGACAGATGAAATG
GAACTGCAGACAGAAACAGAGGCGGGTGAAAACAATAAGGAAACAGGGGTTGCAGCAGCA
TCTTCTTCAATTGTGAGGTGGGAAAGATTTTTGCCTAAAATGGTTTTTAGAATTTTGTTA
GTGGAAGCAGATGATTCTACGCGACAGATTATTACTGCCCTTCTTAGGAAATGCAGTTAT
AAAGTCGCTGCAGTTGCTGATGGTCTAAAGGCGTGGGAGTTGTTGAAAGGTAGACCTCAT
AACATAGACCTTATCCTGACAGAAATTGATCTGCCATCAATCTCTGGATATGCTCTTCTT
TCCTTGATTATGGAGCACGATACTTGCAAGAACATCCCTGTAATAATGATGTCCTCAAAC
GACTCAGTTAGTACGGTTTATAGATGCATGCTTAGAGGTGCAGCAGACTTTCTTGTCAAG
CCTGTTAGGAAGAATGAATTAAAGAACTTGTGGCAACACGTCTGGAGGAGAAGAGCTGCA
AGTGTTGGTTCCCAGGGGCCTCTTGATGAAAGTGTTGCACAACAAAAAATTGAGGCCACA
GCTGAAAACAATGCTTGCAGCAGCCATTCAAGTGGTTATAATGCTTGCGTTCAGATAAAC
CGGGAATGCATTGAGAAAGGAAGTGATGCTCAGAGCTCCTGCACAAAGCCAGAGTTGGAG
AATGAAGGAGAGAACACTGAAGACTTACTGGAGTCTACTCAACCAAATAGGAATGTATCT
CTCCCAAATGGTGCAGATTTGGGGAAAGAACTATGTCTTGAATCTAGTAATAGATTGAGA
ATGTCCGAGAATGATGCTGGAGCTCCTTTAAAAGATGCGAATACAATGACCAGAGGAGAG
GATATAAATTGTGATGATAATTGGGGTCATGTTCGTACAATTGATCAAACTTCTGATGAG
AATCCTGTTCCTCTAACTAAACAAGCCATTGACTTGATCGGAGCGTTCGATAATTACCTA
AAATGTAATTTCAAAAGTTCTTGTTCCAACGTTAGGACAAATAAGGCTGATTCTTCTACA
CAACTGGATCTTTCACTGACAAGACCCCATCCAAGTGGATCTGTAAATCAATTTACAAAT
GAGAAGCACAGATTGAACCATTCTGATGCTTCAGCCTTCACGCGGTATGTGAACAGGGCA
ATGCAGTCTGGACAGTCAATGTCGTCTAGGACTTATTATCAACAGGACTATGAAACTGAT
TCTGATAAGCAGTATCCTGGTCATGCCATTGATTACAACTCAGACGCCCGTGCTGCAATG
ACTAGAACTCACAGTTTTGCCCCTCCTAGCAGCGGAGAACCAGGACCAGCTGAAATTGGA
CATCCTTCTCCGCAGCAGAGAATGACGCCTCTCCCTATTCCAGTGAGAGGTATCAGGTTT
GAGGGACCAAGCAATGCCTACAATTCCATGATAGCTCCAATACTTCGCATGCCATCAGGC
ATTTCGCCGCTGCAAAGTCCAGTGCTTCCACAACTAACAATGAGGGCAAAAGAGGGCACA
AGTCTGAACCTACAACTGATTGTCGATATTTCCCCTCTGCAACCGATCAAAGTACAAATA
GCAGTTGCTGCAATGGTGCTTTAA

Peptide Sequence

PEP ID

XP_016456692.1
PEP Infomation

PREDICTED: two-component response regulator-like APRR5 isoform X2 [Nicotiana tabacum]
Sequence

MGEVVVSSENDMEVIGTDEMELQTETEAGENNKETGVAAASSSIVRWERFLPKMVFRILL
VEADDSTRQIITALLRKCSYKVAAVADGLKAWELLKGRPHNIDLILTEIDLPSISGYALL
SLIMEHDTCKNIPVIMMSSNDSVSTVYRCMLRGAADFLVKPVRKNELKNLWQHVWRRRAA
SVGSQGPLDESVAQQKIEATAENNACSSHSSGYNACVQINRECIEKGSDAQSSCTKPELE
NEGENTEDLLESTQPNRNVSLPNGADLGKELCLESSNRLRMSENDAGAPLKDANTMTRGE
DINCDDNWGHVRTIDQTSDENPVPLTKQAIDLIGAFDNYLKCNFKSSCSNVRTNKADSST
QLDLSLTRPHPSGSVNQFTNEKHRLNHSDASAFTRYVNRAMQSGQSMSSRTYYQQDYETD
SDKQYPGHAIDYNSDARAAMTRTHSFAPPSSGEPGPAEIGHPSPQQRMTPLPIPVRGIRF
EGPSNAYNSMIAPILRMPSGISPLQSPVLPQLTMRAKEGTSLNLQLIVDISPLQPIKVQI
AVAAMVL

Transcript Sequence

Gene sequence data has not been registered.